SS Output

CompDat

Length comp data, comparing across fleets (plot 3 of 3)
file: comp_lendat__page3_multi-fleet_comparison.png

Mean length for 1_Comm_Trawl with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_1_Comm_Trawl.png

Length comp data, retained, 1_Comm_Trawl (plot 3 of 3)
file: comp_lendat_flt1mkt2_page3.png

Length comp data, retained, 1_Comm_Trawl (max=0.94) (plot 3 of 3)
file: comp_lendat_bubflt1mkt2_page3.png

Mean length for 1_Comm_Trawl with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_1_Comm_Trawl.png

Mean length for 2_Comm_Fix with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_2_Comm_Fix.png

Length comp data, whole catch, 5_Rec_CA (plot 3 of 3)
file: comp_lendat_flt5mkt0_page3.png

Length comp data, whole catch, 5_Rec_CA (max=0.94) (plot 3 of 3)
file: comp_lendat_bubflt5mkt0_page3.png

Mean length for 5_Rec_CA with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_5_Rec_CA.png

Mean length for 6_Surv_TRI with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_6_Surv_TRI.png

Length comp data, whole catch, 7_Surv_WCGBTS (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt7mkt0_page1.png

Length comp data, whole catch, 7_Surv_WCGBTS (plot 2 of 2)
file: comp_lendat_flt7mkt0_page2.png

Length comp data, whole catch, 7_Surv_WCGBTS (max=0.14) (plot 2 of 2)
file: comp_lendat_bubflt7mkt0_page2.png

Mean length for 7_Surv_WCGBTS with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_7_Surv_WCGBTS.png

Mean length for 8_Surv_HookLine with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_8_Surv_HookLine.png

Mean length for 9_Research_Lam with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_9_Research_Lam.png

Mean length for 10_CPFV_DebWV with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_10_CPFV_DebWV.png

Sex ratios for length comps, retained, 1_Comm_Trawl (plot 3 of 3)
file: sexratio_data_len_flt1mkt2_page3.png

Sex ratios for length comps, whole catch, 5_Rec_CA (plot 3 of 3)
file: sexratio_data_len_flt5mkt0_page3.png

Sex ratios for length comps, whole catch, 7_Surv_WCGBTS (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt7mkt0_page1.png

Sex ratios for length comps, whole catch, 7_Surv_WCGBTS (plot 2 of 2)
file: sexratio_data_len_flt7mkt0_page2.png

Ghost age comp data, whole catch, 7_Surv_WCGBTS (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagedat_flt7mkt0_page1.png

Ghost age comp data, whole catch, 7_Surv_WCGBTS (plot 2 of 2)
file: comp_gstagedat_flt7mkt0_page2.png

Ghost age comp data, whole catch, 7_Surv_WCGBTS (max=0.41) (plot 2 of 2)
file: comp_gstagedat_bubflt7mkt0_page2.png

Mean age from conditional data (aggregated across length bins) for 7_Surv_WCGBTS with 95% confidence intervals based on current samples sizes.
file: comp_condAALdat_data_weighting_TA1.8_condAge7_Surv_WCGBTS.png

Length comp data, aggregated across time by fleet.
Labels 'retained' and 'discard' indicate discarded or retained sampled for each fleet. Panels without this designation represent the whole catch.
file: comp_lendat__aggregated_across_time.png

Length comp data, comparing across fleets (plot 1 of 2)
file: comp_lendat__page1_multi-fleet_comparison.png

Length comp data, comparing across fleets (plot 2 of 2)
file: comp_lendat__page2_multi-fleet_comparison.png

Length comp data, discard, commercial trawl.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt1mkt1.png

Length comp data, discard, commercial trawl (max=0.19)
file: comp_lendat_bubflt1mkt1.png

Mean length for commercial trawl with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_commercial trawl.png

Length comp data, retained, commercial trawl (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt1mkt2_page1.png

Length comp data, retained, commercial trawl (plot 2 of 2)
file: comp_lendat_flt1mkt2_page2.png

Length comp data, retained, commercial trawl (max=0.94) (plot 2 of 2)
file: comp_lendat_bubflt1mkt2_page2.png

Mean length for commercial trawl with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_commercial trawl.png

Length comp data, discard, commercial fixed-gear.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt2mkt1.png

Length comp data, discard, commercial fixed-gear (max=0.28)
file: comp_lendat_bubflt2mkt1.png

Mean length for commercial fixed-gear with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_commercial fixed-gear.png

Length comp data, retained, commercial fixed-gear (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt2mkt2_page1.png

Length comp data, retained, commercial fixed-gear (plot 2 of 2)
file: comp_lendat_flt2mkt2_page2.png

Length comp data, retained, commercial fixed-gear (max=0.94) (plot 2 of 2)
file: comp_lendat_bubflt2mkt2_page2.png

Mean length for commercial fixed-gear with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_commercial fixed-gear.png

Length comp data, whole catch, recreational California (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt5mkt0_page1.png

Length comp data, whole catch, recreational California (plot 2 of 2)
file: comp_lendat_flt5mkt0_page2.png

Length comp data, whole catch, recreational California (max=0.94) (plot 2 of 2)
file: comp_lendat_bubflt5mkt0_page2.png

Mean length for recreational California with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_recreational California.png

Length comp data, whole catch, Triennial Survey.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt6mkt0.png

Length comp data, whole catch, Triennial Survey (max=0.12)
file: comp_lendat_bubflt6mkt0.png

Mean length for Triennial Survey with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_Triennial Survey.png

Length comp data, whole catch, WCGBT Survey.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt7mkt0.png

Length comp data, whole catch, WCGBT Survey (max=0.14)
file: comp_lendat_bubflt7mkt0.png

Mean length for WCGBT Survey with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_WCGBT Survey.png

Length comp data, whole catch, Hook & Line Survey.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt8mkt0.png

Length comp data, whole catch, Hook & Line Survey (max=0.94)
file: comp_lendat_bubflt8mkt0.png

Mean length for Hook & Line Survey with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_Hook & Line Survey.png

Length comp data, whole catch, Lam research samples.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt9mkt0.png

Length comp data, whole catch, Lam research samples (max=0.1)
file: comp_lendat_bubflt9mkt0.png

Mean length for Lam research samples with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_Lam research samples.png

Length comp data, whole catch, recreational CPFV DebWV.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_lendat_flt10mkt0.png

Length comp data, whole catch, recreational CPFV DebWV (max=0.15)
file: comp_lendat_bubflt10mkt0.png

Mean length for recreational CPFV DebWV with 95% confidence intervals based on current samples sizes.
file: comp_lendat_data_weighting_TA1.8_recreational CPFV DebWV.png

Sex ratios for length comps, discard, commercial trawl.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt1mkt1.png

Sex ratios for length comps, retained, commercial trawl (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt1mkt2_page1.png

Sex ratios for length comps, retained, commercial trawl (plot 2 of 2)
file: sexratio_data_len_flt1mkt2_page2.png

Sex ratios for length comps, discard, commercial fixed-gear.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt2mkt1.png

Sex ratios for length comps, retained, commercial fixed-gear (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt2mkt2_page1.png

Sex ratios for length comps, retained, commercial fixed-gear (plot 2 of 2)
file: sexratio_data_len_flt2mkt2_page2.png

Sex ratios for length comps, whole catch, recreational California (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt5mkt0_page1.png

Sex ratios for length comps, whole catch, recreational California (plot 2 of 2)
file: sexratio_data_len_flt5mkt0_page2.png

Sex ratios for length comps, whole catch, Triennial Survey.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt6mkt0.png

Sex ratios for length comps, whole catch, WCGBT Survey.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt7mkt0.png

Sex ratios for length comps, whole catch, Hook & Line Survey.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt8mkt0.png

Sex ratios for length comps, whole catch, Lam research samples.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size.
file: sexratio_data_len_flt9mkt0.png

Ghost age comp data, retained, commercial trawl.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagedat_flt1mkt2.png

Ghost age comp data, retained, commercial trawl (max=0.98)
file: comp_gstagedat_bubflt1mkt2.png

Ghost age comp data, retained, commercial fixed-gear.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagedat_flt2mkt2.png

Ghost age comp data, retained, commercial fixed-gear (max=0.2)
file: comp_gstagedat_bubflt2mkt2.png

Ghost age comp data, whole catch, Triennial Survey.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagedat_flt6mkt0.png

Ghost age comp data, whole catch, Triennial Survey (max=0.3)
file: comp_gstagedat_bubflt6mkt0.png

Ghost age comp data, whole catch, WCGBT Survey.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagedat_flt7mkt0.png

Ghost age comp data, whole catch, WCGBT Survey (max=0.41)
file: comp_gstagedat_bubflt7mkt0.png

Ghost age comp data, whole catch, Hook & Line Survey.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagedat_flt8mkt0.png

Ghost age comp data, whole catch, Hook & Line Survey (max=0.25)
file: comp_gstagedat_bubflt8mkt0.png

Conditional age-at-length data, whole catch, WCGBT Survey (max=0.98) (plot 1 of 3)
file: comp_condAALdat_bubflt7mkt0_page1.png

Conditional age-at-length data, whole catch, WCGBT Survey (max=0.98) (plot 2 of 3)
file: comp_condAALdat_bubflt7mkt0_page2.png

Conditional age-at-length data, whole catch, WCGBT Survey (max=0.98) (plot 3 of 3)
file: comp_condAALdat_bubflt7mkt0_page3.png

Mean age from conditional data (aggregated across length bins) for WCGBT Survey with 95% confidence intervals based on current samples sizes.
file: comp_condAALdat_data_weighting_TA1.8_condAgeWCGBT Survey.png

Conditional AAL plot, whole catch, WCGBT Survey (plot 1 of 5) These plots show mean age and std. dev. in conditional A@L.
Left plots are mean A@L by size-class (obs. and exp.) with 90% CIs based on adding 1.64 SE of mean to the data.
Right plots in each pair are SE of mean A@L (obs. and exp.) with 90% CIs based on the chi-square distribution.
file: comp_condAALdat_Andre_plotsflt7mkt0_page1.png

Conditional AAL plot, whole catch, WCGBT Survey (plot 2 of 5)
file: comp_condAALdat_Andre_plotsflt7mkt0_page2.png

Conditional AAL plot, whole catch, WCGBT Survey (plot 3 of 5)
file: comp_condAALdat_Andre_plotsflt7mkt0_page3.png

Conditional AAL plot, whole catch, WCGBT Survey (plot 4 of 5)
file: comp_condAALdat_Andre_plotsflt7mkt0_page4.png

Conditional AAL plot, whole catch, WCGBT Survey (plot 5 of 5)
file: comp_condAALdat_Andre_plotsflt7mkt0_page5.png