SS Output

AgeComp

Age comps, aggregated across time by fleet.
Labels 'retained' and 'discard' indicate discarded or retained sampled for each fleet. Panels without this designation represent the whole catch.
file: comp_agefit__aggregated_across_time.png

Pearson residuals, comparing across fleets
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit__multi-fleet_comparison.png

Age comps, retained, North (plot 1 of 3).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_agefit_flt1mkt2_page1.png

Pearson residuals, retained, North (max=3.49) (plot 3 of 3)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit_residsflt1mkt2_page3.png

N-EffN comparison, Age comps, retained, North
file: comp_agefit_sampsize_flt1mkt2.png

Mean age for North with 95% confidence intervals based on current sample sizes.
Francis data weighting method TA1.8: thinner intervals (with capped ends) show result of further adjusting sample sizes based on suggested multiplier (with 95% interval) for age data from North:
1.0002 (0.6954-1.6989)
For more info, see Francis (2011).
file: comp_agefit_data_weighting_TA1.8_North.png

Age comps, retained, South.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_agefit_flt2mkt2.png

Pearson residuals, retained, South (max=1.69)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit_residsflt2mkt2.png

N-EffN comparison, Age comps, retained, South
file: comp_agefit_sampsize_flt2mkt2.png

Mean age for South with 95% confidence intervals based on current sample sizes.
Francis data weighting method TA1.8: thinner intervals (with capped ends) show result of further adjusting sample sizes based on suggested multiplier (with 95% interval) for age data from South:
1.0018 (0.7308-1.8612)
For more info, see Francis (2011).
file: comp_agefit_data_weighting_TA1.8_South.png

Excluded age comps, retained, North (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagefit_flt1mkt2_page1.png

Pearson residuals, retained, North (max=NA) (plot 2 of 2)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_gstagefit_residsflt1mkt2_page2.png

Excluded age comps, retained, South.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagefit_flt2mkt2.png

Pearson residuals, retained, South (max=NA)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_gstagefit_residsflt2mkt2.png

Excluded age comps, whole catch, WCGBTS.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagefit_flt4mkt0.png

Pearson residuals, whole catch, WCGBTS (max=NA)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_gstagefit_residsflt4mkt0.png

Sex ratios for age comps, retained, North (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size. The model expectation is shown in the purple line.
file: sexratio_age_flt1mkt2_page1.png

Sex ratios for age comps, retained, South.
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size. The model expectation is shown in the purple line.
file: sexratio_age_flt2mkt2.png