plotRawData.RdplotRawData creates a set of diagnostic plots and summaries, writing
pdfs and a text file in addition to plotting onscreen and console.
plotRawData(rawData, fname = NULL)an unfiltered PacFIN dataset
A filename with the appropriate extension, used to save the
function output to the disk. For example, LenComps.csv or
file.path(getwd(), "SampleSize.csv"). Full, relative, or simple paths are
allowed because the argument is used as is, i.e., not redirected to a
directory different than getwd(). Note that various functions within
pacfintools have different default values for this input argument. If
NULL in writeComps, then the resulting file name will be based on what
type of composition data is being generated, i.e., PacFIN_lengths.out,
or PacFIN_ages.out for length or age data, respectively.
Run plotRawData to visualize and summarize the PacFIN data prior to
running cleanPacFIN.
Will create a filename from the species ID if one is not provided.