Plots the designed based biomass estimates with confidence intervals
PlotBio.fn.Rd
Plots the designed based biomass estimates with confidence intervals
Usage
PlotBio.fn(
dir = NULL,
dat,
CI = 0.95,
scalar = 1e+06,
gap = 0.03,
ylab = "Biomass ('000 mt)",
xlab = "Year",
main = NULL,
ylim = NULL,
add = FALSE,
col = "black",
dopng = lifecycle::deprecated(),
...
)
Arguments
- dir
Directory where output will be saved. The directory where the file should be saved. If dir = NULL no output will be saved.
- dat
object created by the
Biomasss.fn()
- CI
A numerical value that specifies the confidence interval to return. Values should be between 0.01 to 0.99.
- scalar
simply the divisor for the biomass
- gap
a value that introduces a slight gap between the point estimate and the start of the line for the CI. A gap too large will invert the CI, making it look huge. You should know when this happens
- ylab
y-axis text label
- xlab
x-axis text label
- main
plot label
- ylim
y-limits
- add
add additional line to plot
- col
color
- dopng
Deprecated with nwfscSurvey 2.1 because providing a non-NULL value to
dir
can serve the same purpose asdopng = TRUE
without the potential for errors whendopng = TRUE
anddir = NULL
. Thus, users no longer have to specifydopng
to save the plot as a png.- ...
Additional arguments for the plots